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Array[Consensus] not registered #1367

fnothaft opened this issue Jan 23, 2017 · 0 comments

Array[Consensus] not registered #1367

fnothaft opened this issue Jan 23, 2017 · 0 comments


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@fnothaft fnothaft commented Jan 23, 2017

Needed for FromKnowns consensus mode:

com.esotericsoftware.kryo.KryoException: java.lang.IllegalArgumentException: Class is not registered: org.bdgenomics.adam.algorithms.consensus.Consensus[]
Note: To register this class use: kryo.register(org.bdgenomics.adam.algorithms.consensus.Consensus[].class);
Serialization trace:
otherElements (org.apache.spark.util.collection.CompactBuffer)
at com.esotericsoftware.kryo.serializers.FieldSerializer$ObjectField.write(
at com.esotericsoftware.kryo.serializers.FieldSerializer.write(
at com.esotericsoftware.kryo.Kryo.writeClassAndObject(
at com.twitter.chill.Tuple2Serializer.write(TupleSerializers.scala:37)
at com.twitter.chill.Tuple2Serializer.write(TupleSerializers.scala:33)
at com.esotericsoftware.kryo.Kryo.writeClassAndObject(
@fnothaft fnothaft added the bug label Jan 23, 2017
@fnothaft fnothaft added this to the 0.21.1 milestone Jan 23, 2017
@fnothaft fnothaft self-assigned this Jan 23, 2017
fnothaft added a commit to fnothaft/adam that referenced this issue Jan 23, 2017
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