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Add quality score binner #1462

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fnothaft opened this issue Mar 31, 2017 · 0 comments
Closed

Add quality score binner #1462

fnothaft opened this issue Mar 31, 2017 · 0 comments
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@fnothaft fnothaft commented Mar 31, 2017

  • Should support lumping quality scores into a set number of bins.
  • We should characterize the impact of quality score binning on disk space.
@fnothaft fnothaft self-assigned this Mar 31, 2017
@fnothaft fnothaft added this to the 0.23.0 milestone Mar 31, 2017
@fnothaft fnothaft mentioned this issue Apr 11, 2017
3 of 3 tasks complete
fnothaft added a commit to fnothaft/adam that referenced this issue May 12, 2017
Resolves bigdatagenomics#1462. Adds an API for binning quality scores to `AlignmentRecordRDD`
and `FragmentRDD`. Exposes this on the `Transform` CLI.
heuermh added a commit that referenced this issue May 12, 2017
Resolves #1462. Adds an API for binning quality scores to `AlignmentRecordRDD`
and `FragmentRDD`. Exposes this on the `Transform` CLI.
@heuermh heuermh added this to Completed in Release 0.23.0 May 30, 2017
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