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ProcessingStep missing from adam-codegen #1623

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heuermh opened this Issue Jul 23, 2017 · 0 comments

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heuermh commented Jul 23, 2017

Discovered as a compile error when updating #1505.

$ mvn compile
...
[ERROR] adam/adam-core/target/generated-sources/src/main/scala/org/bdgenomics/adam/sql/Schemas.scala:1001: error: not found: type ProcessingStep
[ERROR]     val processingSteps: Seq[ProcessingStep]) extends Product {
[ERROR]                              ^
[ERROR] adam/adam-core/target/generated-sources/src/main/scala/org/bdgenomics/adam/sql/Schemas.scala:957: error: not found: type ProcessingStep
[ERROR]     processingSteps: Seq[ProcessingStep]): RecordGroup = {
[ERROR]                          ^
[ERROR] adam/adam-core/target/generated-sources/src/main/scala/org/bdgenomics/adam/sql/Schemas.scala:985: error: not found: value ProcessingStep
[ERROR]       record.getProcessingSteps().toSeq.map(r => ProcessingStep.fromAvro(r)))
[ERROR]                                                  ^
[ERROR] three errors found
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