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Unable to create .adam from .sam #1717
Can anyone help for this---
Exception in thread "main" java.io.FileNotFoundException: Couldn't find any files matching /home/rokshan.jahan/project/spark-genome-alignment-demo/build/adam/adam-co/src/test/resources/small.sam. If you are trying to glob a directory of Parquet files, you need to glob inside the directory as well (e.g., "glob.me..adam/", instead of "glob.me.*.adam".
Thanks for quick reply
./adam-submit transformAlignments /home/rokshan.jahan/project/spark-genome-alignment-demo/build/adam/adam-co/src/test/resources/small.sam /home/rokshan.jahan/project/spark-genome-alignment-demo/build/adam/adam-core/src/test/resources/small.adam