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Mark Duplicates #1726

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Rokshan2016 opened this issue Sep 15, 2017 · 2 comments
Closed

Mark Duplicates #1726

Rokshan2016 opened this issue Sep 15, 2017 · 2 comments
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@Rokshan2016
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@Rokshan2016 Rokshan2016 commented Sep 15, 2017

Is it a right command to for duplicate removal- -mark_duplicate_reads

@heuermh
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@heuermh heuermh commented Sep 18, 2017

Yes

$ adam-submit transformAlignments \
  -mark_duplicate_reads \
  in.alignments.adam \
  out.alignments.adam
@heuermh heuermh closed this Sep 18, 2017
@Rokshan2016
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@Rokshan2016 Rokshan2016 commented Sep 18, 2017

Got it

Thanks

@heuermh heuermh added this to the 0.23.0 milestone Dec 7, 2017
@heuermh heuermh added this to Completed in Release 0.23.0 Jan 4, 2018
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