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Fix link anchors and other issues in readthedocs #1822

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heuermh opened this Issue Dec 7, 2017 · 4 comments

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heuermh commented Dec 7, 2017

Some link anchors and other formatting styles were broken after conversion to rst.

File pull requests against this issue for these and other issues with the new documentation hosted at http://adam.readthedocs.io/en/latest/.

E.g.

a known variation database (e.g., dbSNP). {#known-snps}
See candidate generation and realignment. {#known-indels}
While the `transformAlignments <#transformAlignments>`__ command

Regarding Pygments styles, I prefer lovelace and arduino over the default.

@heuermh heuermh added this to the 0.23.0 milestone Dec 7, 2017

@heuermh heuermh self-assigned this Dec 7, 2017

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You have a small formating issue at http://adam.readthedocs.io/en/latest/architecture/overview/ with \end{itemize}

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antonkulaga commented Dec 12, 2017

You have a small formating issue at http://adam.readthedocs.io/en/latest/architecture/overview/ with \end{itemize}

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at http://adam.readthedocs.io/en/latest/api/joins/ it is better to separate right and inner by the line on the pic

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antonkulaga commented Dec 12, 2017

at http://adam.readthedocs.io/en/latest/api/joins/ it is better to separate right and inner by the line on the pic

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You have a small formating issue at http://adam.readthedocs.io/en/latest/architecture/overview/ with \end{itemize}

Thanks, I think we fixed that in #1827 already.

at http://adam.readthedocs.io/en/latest/api/joins/ it is better to separate right and inner by the line on the pic

Good suggestion, thanks again.

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heuermh commented Dec 12, 2017

You have a small formating issue at http://adam.readthedocs.io/en/latest/architecture/overview/ with \end{itemize}

Thanks, I think we fixed that in #1827 already.

at http://adam.readthedocs.io/en/latest/api/joins/ it is better to separate right and inner by the line on the pic

Good suggestion, thanks again.

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heuermh Dec 13, 2017

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Fixed by #1827

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heuermh commented Dec 13, 2017

Fixed by #1827

@heuermh heuermh closed this Dec 13, 2017

@heuermh heuermh added this to Completed in Release 0.23.0 Jan 4, 2018

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