Join GitHub today
GitHub is home to over 28 million developers working together to host and review code, manage projects, and build software together.
Sign uploadIndexed bam lazily throws Exception if index does not exist #1830
Comments
akmorrow13
referenced this issue
Dec 13, 2017
Merged
Added check for bam index files in loadIndexedBam #1831
fnothaft
added this to the 0.24.0 milestone
Jan 9, 2018
heuermh
added this to Triage
in Release 0.24.0
Jan 9, 2018
This comment has been minimized.
This comment has been minimized.
|
Fixed by #1831 |
heuermh
closed this
Jan 9, 2018
heuermh
moved this from Triage
to Completed
in Release 0.24.0
Jan 9, 2018
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
akmorrow13 commentedDec 13, 2017
If bai file is missing, an error will only occur when performing a collect on the underlying rdd. It would be nice to immediately throw and error if the index does not exist.