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Support adding VCF header lines from Python #1840

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fnothaft opened this Issue Dec 20, 2017 · 0 comments

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fnothaft commented Dec 20, 2017

  • Consolidate VCFHeaderLine code down into a single trait
  • Add functions to add filter/format/info lines
  • Expose said functions in Python

@fnothaft fnothaft added this to the 0.24.0 milestone Dec 20, 2017

@fnothaft fnothaft self-assigned this Dec 20, 2017

@heuermh heuermh added this to Triage in Release 0.24.0 Jan 4, 2018

fnothaft added a commit to fnothaft/adam that referenced this issue Mar 1, 2018

[ADAM-1840] Support adding VCF header lines from Python.
Resolves bigdatagenomics#1840. Split header line functionality out into VCFSupportingGenomicRDD
trait, which has a Scala/Java API for adding header lines. This is then mirrored
in Python.

@heuermh heuermh closed this in #1930 Mar 5, 2018

heuermh added a commit that referenced this issue Mar 5, 2018

[ADAM-1840] Support adding VCF header lines from Python.
Resolves #1840. Split header line functionality out into VCFSupportingGenomicRDD
trait, which has a Scala/Java API for adding header lines. This is then mirrored
in Python.
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