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Duplicate OUTPUT command line argument metaVar in adam2fastq #776

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heuermh opened this Issue Aug 17, 2015 · 0 comments

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heuermh commented Aug 17, 2015

$ ./bin/adam-submit adam2fastq
15/08/17 18:03:16 INFO ADAMMain: ADAM invoked with args: "adam2fastq"
Argument "INPUT" is required
 INPUT :  The file to load as input
 OUTPUT : The file to save as output
 OUTPUT : When writing FASTQ data, all second-in-pair reads will go here, if this
   argument is provided
...

@fnothaft fnothaft added this to the 0.20.0 milestone Jul 20, 2016

@fnothaft fnothaft self-assigned this Jul 20, 2016

fnothaft added a commit to fnothaft/adam that referenced this issue Jul 20, 2016

@heuermh heuermh closed this in 9c72620 Jul 20, 2016

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