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[ADAM-1242] Clean up dead code in org.bdgenomics.adam.util. #1243
Resolves #1242. Removed: * org.bdgenomics.adam.util.ImplicitJavaConversions * org.bdgenomics.adam.util.IntervalListReader * org.bdgenomics.adam.util.MapTools * org.bdgenomics.adam.util.RegExp * org.bdgenomics.adam.util.Util
…nup: * Moved `NormalizationUtils` to `org.bdgenomics.adam.algorithms.consensus`, and made it package private to `consensus`. * Moved `MdTag` to `org.bdgenomics.adam.models`. * Moved `QualityScore` to `org.bdgenomics.adam.models` and made it package private to `consensus`.