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Add VCF headers for fields in Variant and VariantAnnotation records #1281

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merged 1 commit into from Nov 18, 2016

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@heuermh
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heuermh commented Nov 18, 2016

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AmplabJenkins commented Nov 18, 2016

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/1629/
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@fnothaft
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fnothaft commented Nov 18, 2016

Are we going to add the FORMAT keys as well, is that going to be a later PR, or are the htsjdk ones OK there?

@heuermh
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heuermh commented Nov 18, 2016

Standard FORMAT keys will come later, once we nail down the Genotype and GenotypeAnnotation schema. Although, if you want to whack the useless ones that are there currently . . . :)

@fnothaft fnothaft merged commit 4a4ff1e into bigdatagenomics:master Nov 18, 2016
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fnothaft commented Nov 18, 2016

Standard FORMAT keys will come later, once we nail down the Genotype and GenotypeAnnotation schema. Although, if you want to whack the useless ones that are there currently . . . :)

I'll pick these up. PR coming shortly.

@heuermh heuermh deleted the heuermh:standard-headers branch Nov 18, 2016
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