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[ADAM-1840] Support adding VCF header lines from Python. #1930

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@fnothaft
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@fnothaft fnothaft commented Mar 1, 2018

Resolves #1840. Split header line functionality out into VCFSupportingGenomicRDD trait, which has a Scala/Java API for adding header lines. This is then mirrored in Python.

Resolves #1840. Split header line functionality out into VCFSupportingGenomicRDD
trait, which has a Scala/Java API for adding header lines. This is then mirrored
in Python.
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@coveralls coveralls commented Mar 1, 2018

Coverage Status

Coverage decreased (-0.2%) to 82.435% when pulling fca816a on fnothaft:issues/1840-add-header-lines into c691356 on bigdatagenomics:master.

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@coveralls coveralls commented Mar 1, 2018

Coverage Status

Coverage decreased (-0.2%) to 82.435% when pulling fca816a on fnothaft:issues/1840-add-header-lines into c691356 on bigdatagenomics:master.

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@coveralls coveralls commented Mar 1, 2018

Coverage Status

Coverage decreased (-0.2%) to 82.435% when pulling fca816a on fnothaft:issues/1840-add-header-lines into c691356 on bigdatagenomics:master.

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@AmplabJenkins AmplabJenkins commented Mar 1, 2018

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/2687/
Test PASSed.

@heuermh heuermh added this to the 0.24.0 milestone Mar 1, 2018
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heuermh approved these changes Mar 5, 2018
@heuermh heuermh merged commit fbc7218 into bigdatagenomics:master Mar 5, 2018
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Codacy/PR Quality Review Good work! A positive pull request.
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@heuermh
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@heuermh heuermh commented Mar 5, 2018

Thank you, @fnothaft

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4 participants