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Rebase PR#238 onto master #243

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merged 4 commits into from May 14, 2014

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massie commented May 14, 2014

This rebases Michael Linderman's work to Implement contig-to-RefSeq translation, refactor SequenceDictionary with RefSeq information (and without numeric IDs) and prepare ADAMGenotype for incorporating reference model information.

This pull request closes #238.

mlinderm and others added some commits May 5, 2014

Implement contig-to-RefSeq translation, refactor SequenceDictionary w…
…ith RefSeq information (and without numeric IDs) and prepare ADAMGenotype for incorporating reference model information.
Further implement reference model in variant conversion and address c…
…omments in PR re: incorporation of RefSeq IDs into SequenceDictioanry
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All automated tests passed.
Refer to this link for build results: https://amplab.cs.berkeley.edu/jenkins/job/ADAM-prb/323/

AmplabJenkins commented May 14, 2014

All automated tests passed.
Refer to this link for build results: https://amplab.cs.berkeley.edu/jenkins/job/ADAM-prb/323/

massie added a commit that referenced this pull request May 14, 2014

Merge pull request #243 from massie/pr238
Rebase PR#238 onto master

@massie massie merged commit 0b2cf5d into bigdatagenomics:master May 14, 2014

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@massie massie deleted the massie:pr238 branch Sep 2, 2015

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