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[ADAM-578] Update end of read when trimming. #579

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merged 1 commit into from Feb 11, 2015

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fnothaft commented Feb 10, 2015

Resolves #578. Adds logic to track the end of the read when trimming. Evidently, this wasn't in there. I think this code may have been in the repository before we added the end field back, and we forgot to tack the end logic back on.

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Test PASSed.
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AmplabJenkins commented Feb 10, 2015

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/ADAM-prb/591/
Test PASSed.

massie added a commit that referenced this pull request Feb 11, 2015

Merge pull request #579 from fnothaft/trim-before-bqsr-bug
[ADAM-578] Update end of read when trimming.

@massie massie merged commit c5d2903 into bigdatagenomics:master Feb 11, 2015

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massie Feb 11, 2015

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Thanks, Frank!

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massie commented Feb 11, 2015

Thanks, Frank!

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