[CANNOLI-95] Bump ADAM dependency version to 0.24.0-SNAPSHOT #102
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Test FAILed. Build result: ABORTEDGitHub pull request #102 of commit b78fbf2 automatically merged.Notifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'[EnvInject] - Loading node environment variables.Building remotely on amp-jenkins-worker-03 (centos spark-test) in workspace /home/jenkins/workspace/cannoli-prbWiping out workspace first.Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/cannoli.git > /home/jenkins/git2/bin/git init /home/jenkins/workspace/cannoli-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/cannoli.git > /home/jenkins/git2/bin/git --version # timeout=10 > /home/jenkins/git2/bin/git fetch --tags --progress https://github.com/bigdatagenomics/cannoli.git +refs/heads/:refs/remotes/origin/ # timeout=15 > /home/jenkins/git2/bin/git config remote.origin.url https://github.com/bigdatagenomics/cannoli.git # timeout=10 > /home/jenkins/git2/bin/git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > /home/jenkins/git2/bin/git config remote.origin.url https://github.com/bigdatagenomics/cannoli.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/cannoli.git > /home/jenkins/git2/bin/git fetch --tags --progress https://github.com/bigdatagenomics/cannoli.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > /home/jenkins/git2/bin/git rev-parse origin/pr/102/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a -v --no-abbrev --contains e8260cb # timeout=10Checking out Revision e8260cb (origin/pr/102/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f e8260cb30f23c034c6fcdc7e55d24937d76f65baFirst time build. Skipping changelog.Triggering cannoli-prb ? 2.7.3,2.11,2.2.1,centoscannoli-prb ? 2.7.3,2.11,2.2.1,centos completed with result ABORTEDNotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'Test FAILed. |
Pulling the Spark dependency version back to 2.1.0 passes tests. In both cases (Spark 2.2.1 vs 2.1.0 as compile-time dependency version), the $ javap -cp assembly/target/cannoli-assembly-spark2_2.11-0.2.0-SNAPSHOT.jar org.apache.hadoop.mapreduce.InputSplit
Compiled from "InputSplit.java"
public abstract class org.apache.hadoop.mapreduce.InputSplit {
public org.apache.hadoop.mapreduce.InputSplit();
public abstract long getLength() throws java.io.IOException, java.lang.InterruptedException;
public abstract java.lang.String[] getLocations() throws java.io.IOException, java.lang.InterruptedException;
} which as the stack trace indicates is missing a |
Test PASSed. |
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Fixes #95
Work in progress, currently unit tests hang with