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Update default docker image for bowtie2. #140

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merged 1 commit into from Nov 8, 2018

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heuermh commented Nov 8, 2018

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@heuermh heuermh added this to the 0.3.0 milestone Nov 8, 2018

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AmplabJenkins commented Nov 8, 2018

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/144/

Build result: FAILURE

GitHub pull request #140 of commit 90d7cbf automatically merged.Notifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'[EnvInject] - Loading node environment variables.Building remotely on amp-jenkins-worker-03 (centos spark-test) in workspace /home/jenkins/workspace/cannoli-prbWiping out workspace first.Cloning the remote Git repositoryCloning repository https://github.com/bigdatagenomics/cannoli.git > git init /home/jenkins/workspace/cannoli-prb # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/cannoli.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/bigdatagenomics/cannoli.git +refs/heads/:refs/remotes/origin/ # timeout=15 > git config remote.origin.url https://github.com/bigdatagenomics/cannoli.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/:refs/remotes/origin/ # timeout=10 > git config remote.origin.url https://github.com/bigdatagenomics/cannoli.git # timeout=10Fetching upstream changes from https://github.com/bigdatagenomics/cannoli.git > git fetch --tags --progress https://github.com/bigdatagenomics/cannoli.git +refs/pull/:refs/remotes/origin/pr/ # timeout=15 > git rev-parse origin/pr/140/merge^{commit} # timeout=10 > git branch -a -v --no-abbrev --contains 69b9d0e # timeout=10Checking out Revision 69b9d0e (origin/pr/140/merge) > git config core.sparsecheckout # timeout=10 > git checkout -f 69b9d0e5584c3537f65928748d152d37fe18ea98First time build. Skipping changelog.Triggering cannoli-prb ? 2.7.3,2.11,2.2.1,ubuntucannoli-prb ? 2.7.3,2.11,2.2.1,ubuntu completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

@heuermh heuermh force-pushed the heuermh:bowtie2-docker branch from 90d7cbf to 1028903 Nov 8, 2018

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AmplabJenkins commented Nov 8, 2018

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/146/
Test PASSed.

@heuermh heuermh merged commit 7e3a5f0 into bigdatagenomics:master Nov 8, 2018

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@heuermh heuermh deleted the heuermh:bowtie2-docker branch Nov 8, 2018

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coveralls commented Nov 8, 2018

Coverage Status

Coverage remained the same at 19.242% when pulling 1028903 on heuermh:bowtie2-docker into 2f5b02c on bigdatagenomics:master.

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