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imported term 'Laboratory' #83

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zhengj2007 opened this issue Sep 2, 2021 · 5 comments
Open

imported term 'Laboratory' #83

zhengj2007 opened this issue Sep 2, 2021 · 5 comments
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@zhengj2007
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OBIB imported term 'Laboratory' with unresolved IRI, http://vivoweb.org/ontology/core#Laboratory
(http://www.ontobee.org/ontology/OBIB?iri=http%3A%2F%2Fvivoweb.org%2Fontology%2Fcore%23Laboratory)

It indicated the term imported from ERO. However, the ERO is inactive and ERO: Laboratory (http://purl.obolibrary.org/obo/ERO_0000001) was deprecated in ERO.

We may consider either assigning OBIB ID to it or contacting OBI developers for adding it in OBI.

@cstoeckert
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will request term from OBI

@mbrochhausen
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Did we ever import the OBI term?

@zhengj2007
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Discussed on OBI call starting with label, 'laboratory organization' and ERO definition.

After few round discussions, here is the final proposal for the term.

Label: Biomedical laboratory
Textual definition: An organization that performs biomedical assays, processes biospecimens, analyses biomedical data and conducts similar planned processes.
Definition source: OBIB
Parent: organization

Does it fit our needs?

@cstoeckert
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Has been added to OBI and we will import when available in the next OBI release.

@zhengj2007
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@jmwhorton Could you please replace http://vivoweb.org/ontology/core#Laboratory with OBI_0003250 'biomedical laboratory organization?
(remove http://vivoweb.org/ontology/core#Laboratory from externalByhand.owl and add OBI_0003250 in OBI ontofox input file)

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3 participants