LICENSE

We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow the functionality to be easily extended or tailored through developing custom plugins. SBEGUI, a menu-driven Graphical User Interface (GUI) of SBEToolbox enables easy access to various network and graph algorithms for programmers and non-programmers alike.

Documentation : https://promis.tamu.edu/projects/sbetoolbox/wiki/SBEToolbox_User_Manual

Reference DOI

Konganti K, Wang G, Yang E, Cai JJ* (2013). SBEToolbox: a Matlab Toolbox for Biological Network Analysis. Evolutionary Bioinformatics 2013:9 355-362

sbegui_v1

Checkout repo :

  • Stable
    • Git :

      git clone https://github.com/biocoder/SBEToolbox.git
      cd SBEToolbox
      git checkout v1.3.3
      
    • Subversion :

      svn co https://github.com/biocoder/SBEToolbox/tags/v1.3.3 SBEToolbox_v1.3.3
      
  • Development
    • Git :

      git clone https://github.com/biocoder/SBEToolbox.git
      
    • Subversion :

      svn co https://github.com/biocoder/SBEToolbox/trunk
      

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SBEToolbox Version 1.3.2

@biocoder biocoder released this May 15, 2014 · 13 commits to master since this release

v1.3.2

Updating version number to tag new release

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SBEToolbox Version 1.3.1

@biocoder biocoder released this Jan 15, 2014 · 15 commits to master since this release

v1.3.1

No version info needed now in README.md

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SBEToolbox Version 1.3

@biocoder biocoder released this Dec 3, 2013 · 17 commits to master since this release

v1.3

Fixing a bug where pdb database was removed from annotation

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SBEToolbox Version 1.2

@biocoder biocoder released this Nov 27, 2013 · 18 commits to master since this release

v1.2

Updating README.md

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SBEToolbox Version 1.1

@biocoder biocoder released this Aug 6, 2013 · 38 commits to master since this release

The Version 1.1 release of SBEToolbox as described in the manuscript …

…reference.

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