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When insertions occur before the first nucleotide of the transcript, the current normalizer would result in n.0_1insXXX, then the interval validator would fail as the start should never be 0. For example,
when normalizing variant ''NM_212556.2:c.1delinsCA", the normalizer would firstly covert to n. representation of this variant "NM_212556.2:n.1delinsCA" (The CDS of this transcript starts just from 1 and the first nucleotide is A), then normalized to "NM_212556.2:n.0_1insC". When the normalizer tries to convert back to c. variants, the internal validator in n_to_c would raise exception as the start should not be 0.
The text was updated successfully, but these errors were encountered:
When insertions occur before the first nucleotide of the transcript, the current normalizer would result in n.0_1insXXX, then the interval validator would fail as the start should never be 0. For example,
when normalizing variant ''NM_212556.2:c.1delinsCA", the normalizer would firstly covert to n. representation of this variant "NM_212556.2:n.1delinsCA" (The CDS of this transcript starts just from 1 and the first nucleotide is A), then normalized to "NM_212556.2:n.0_1insC". When the normalizer tries to convert back to c. variants, the internal validator in n_to_c would raise exception as the start should not be 0.
The text was updated successfully, but these errors were encountered: