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{% set version = "1.6.0" %}
{% set name = "DMCHMM" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 4b451c76bb34a68bc240b018e31eec15
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
noarch: generic
# Suggests: testthat, knitr
requirements:
host:
- 'bioconductor-biocparallel >=1.18.0,<1.19.0'
- 'bioconductor-genomicranges >=1.36.0,<1.37.0'
- 'bioconductor-iranges >=2.18.0,<2.19.0'
- 'bioconductor-rtracklayer >=1.44.0,<1.45.0'
- 'bioconductor-s4vectors >=0.22.0,<0.23.0'
- 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
- r-base
- r-calibrate
- r-fdrtool
- r-multcomp
run:
- 'bioconductor-biocparallel >=1.18.0,<1.19.0'
- 'bioconductor-genomicranges >=1.36.0,<1.37.0'
- 'bioconductor-iranges >=2.18.0,<2.19.0'
- 'bioconductor-rtracklayer >=1.44.0,<1.45.0'
- 'bioconductor-s4vectors >=0.22.0,<0.23.0'
- 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
- r-base
- r-calibrate
- r-fdrtool
- r-multcomp
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: GPL-3
summary: 'A pipeline for identifying differentially methylated CpG sites using Hidden Markov Model in bisulfite sequencing data.'
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