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{% set version = "2.18.0" %}
{% set name = "IRanges" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 3d00ac5aba67be591e3433abeb3c355d
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
# Suggests: XVector, GenomicRanges, Rsamtools, GenomicAlignments, GenomicFeatures, BSgenome.Celegans.UCSC.ce2, pasillaBamSubset, RUnit, BiocStyle
requirements:
host:
- 'bioconductor-biocgenerics >=0.30.0,<0.31.0'
- 'bioconductor-s4vectors >=0.22.0,<0.23.0'
- r-base
run:
- 'bioconductor-biocgenerics >=0.30.0,<0.31.0'
- 'bioconductor-s4vectors >=0.22.0,<0.23.0'
- r-base
build:
- {{ compiler('c') }}
- make
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: Artistic-2.0
summary: 'Provides efficient low-level and highly reusable S4 classes for storing, manipulating and aggregating over annotated ranges of integers. Implements an algebra of range operations, including efficient algorithms for finding overlaps and nearest neighbors. Defines efficient list-like classes for storing, transforming and aggregating large grouped data, i.e., collections of atomic vectors and DataFrames.'
extra:
identifiers:
- biotools:iranges
parent_recipe:
name: bioconductor-iranges
path: recipes/bioconductor-iranges
version: 2.14.12
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