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{% set version = "1.18.0" %}
{% set name = "SemDist" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 9a7024a94ff4b88d11879bce11a2aaf3
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
noarch: generic
# Suggests: GOSemSim
requirements:
host:
- 'bioconductor-annotate >=1.62.0,<1.63.0'
- 'bioconductor-annotationdbi >=1.46.0,<1.47.0'
- 'bioconductor-go.db >=3.8.0,<3.9.0'
- r-base
run:
- 'bioconductor-annotate >=1.62.0,<1.63.0'
- 'bioconductor-annotationdbi >=1.46.0,<1.47.0'
- 'bioconductor-go.db >=3.8.0,<3.9.0'
- r-base
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: 'GPL (>= 2)'
summary: 'This package implements methods to calculate information accretion for a given version of the gene ontology and uses this data to calculate remaining uncertainty, misinformation, and semantic similarity for given sets of predicted annotations and true annotations from a protein function predictor.'
extra:
identifiers:
- biotools:semdist
- doi:10.1038/nmeth.3252
parent_recipe:
name: bioconductor-semdist
path: recipes/bioconductor-semdist
version: 1.14.0
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