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{% set version = "1.58.0" %}
{% set name = "siggenes" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
md5: c94454bf57390fbc699c3b02144177d6
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
noarch: generic
# Suggests: affy, annotate, genefilter, KernSmooth
requirements:
host:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-multtest >=2.40.0,<2.41.0'
- r-base
- 'r-scrime >=1.2.5'
run:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-multtest >=2.40.0,<2.41.0'
- r-base
- 'r-scrime >=1.2.5'
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: 'LGPL (>= 2)'
summary: 'Identification of differentially expressed genes and estimation of the False Discovery Rate (FDR) using both the Significance Analysis of Microarrays (SAM) and the Empirical Bayes Analyses of Microarrays (EBAM).'
extra:
identifiers:
- biotools:siggenes
- doi:10.1186/1471-2105-9-144
parent_recipe:
name: bioconductor-siggenes
path: recipes/bioconductor-siggenes
version: 1.54.0
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