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{% set version = "1.4.0" %}
{% set name = "vidger" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
md5: dfcf52a1cd622ac1622d2eb2c2d34305
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
noarch: generic
# Suggests: BiocStyle, testthat
requirements:
host:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-deseq2 >=1.24.0,<1.25.0'
- 'bioconductor-edger >=3.26.0,<3.27.0'
- 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
- r-base
- r-ggally
- r-ggplot2
- r-ggrepel
- r-knitr
- r-rcolorbrewer
- r-rmarkdown
- r-scales
- r-tidyr
run:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-deseq2 >=1.24.0,<1.25.0'
- 'bioconductor-edger >=3.26.0,<3.27.0'
- 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
- r-base
- r-ggally
- r-ggplot2
- r-ggrepel
- r-knitr
- r-rcolorbrewer
- r-rmarkdown
- r-scales
- r-tidyr
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: 'GPL-3 | file LICENSE'
summary: 'The aim of vidger is to rapidly generate information-rich visualizations for the interpretation of differential gene expression results from three widely-used tools: Cuffdiff, DESeq2, and edgeR.'
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