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{% set version = "2.30.0" %}
{% set name = "XDE" %}
{% set bioc = "3.9" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 1edf40b637ab430bbb22f79a1d35d1d8
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
# Suggests: MASS, RUnit
requirements:
host:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-biocgenerics >=0.30.0,<0.31.0'
- 'bioconductor-genefilter >=1.66.0,<1.67.0'
- 'bioconductor-genemeta >=1.56.0,<1.57.0'
- 'bioconductor-mergemaid >=2.56.0,<2.57.0'
- 'bioconductor-siggenes >=1.58.0,<1.59.0'
- r-base
- r-gtools
- r-mvtnorm
- r-rcolorbrewer
run:
- 'bioconductor-biobase >=2.44.0,<2.45.0'
- 'bioconductor-biocgenerics >=0.30.0,<0.31.0'
- 'bioconductor-genefilter >=1.66.0,<1.67.0'
- 'bioconductor-genemeta >=1.56.0,<1.57.0'
- 'bioconductor-mergemaid >=2.56.0,<2.57.0'
- 'bioconductor-siggenes >=1.58.0,<1.59.0'
- r-base
- r-gtools
- r-mvtnorm
- r-rcolorbrewer
build:
- {{ compiler('c') }}
- {{ compiler('cxx') }}
- make
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: LGPL-2
summary: 'Multi-level model for cross-study detection of differential gene expression.'
extra:
identifiers:
- biotools:xde
parent_recipe:
name: bioconductor-xde
path: recipes/bioconductor-xde
version: 2.26.0
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