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{% set name = "BSMAP" %}
{% set version = "2.90" %}
{% set sha256 = "8b5ae4ba404e898adac14b0338c88455f882bee556a92d269de87c993f007ac2" %}
package:
name: {{ name|lower }}
version: {{ version }}
source:
sha256: {{ sha256 }}
url: http://lilab.research.bcm.edu/dldcc-web/lilab/yxi/{{ name|lower }}/{{ name|lower }}-{{ version }}.tgz
patches:
- path.patch
- osx_compile.patch # [osx]
build:
number: 2
skip: True # [py3k]
requirements:
build:
- {{ compiler('cxx') }}
- python
host:
- zlib
run:
- python
- zlib
- samtools
test:
commands:
- bsmap -h 2>&1 | grep "bsmap" > /dev/null
- bsp2sam.py -h
- methdiff.py -h
- methratio.py -h
- sam2bam.sh -h
about:
home: https://code.google.com/archive/p/bsmap/
license: GNU GPL v3
license_family: GPL
license_file: GPL_3.0.txt
summary: BSMAP is a short reads mapping software for bisulfite sequencing reads.
extra:
identifiers:
- biotools:bsmap
doi: doi.org/10.1186/1471-2105-10-232
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