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{% set name = "circlator" %}
{% set version = "1.5.5" %}
package:
name: {{ name|lower }}
version: {{ version }}
source:
url: https://pypi.io/packages/source/c/circlator/circlator-{{ version }}.tar.gz
sha256: d3bfa12c4f9d4489331c42331a7765719af0c7a2aca7aa860dc996e27edd671a
build:
noarch: python
number: 3
requirements:
host:
- python >=3
- setuptools
run:
- python >=3
- openpyxl
- pyfastaq >=3.12.1
- pysam >=0.8.1
- pymummer >=0.9.0
- mummer >=3.23
- bio_assembly_refinement >=0.4.0
- bwa
- canu >=1.8
- amos >=3.1.0
- prodigal
- samtools
- spades
test:
imports:
- circlator
- circlator.tasks
about:
home: https://github.com/sanger-pathogens/circlator
license: GNU General Public License v3 (GPLv3)
summary: 'circlator: a tool to circularise genome assemblies'
license_family: GPL
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