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package:
name: intervene
version: "0.6.4"
source:
url: https://files.pythonhosted.org/packages/0c/75/f25de59d86d590609adbf1b9c3ad1e6f37bfa7a7be99dec7248f3a1a4a8e/intervene-0.6.4.tar.gz
sha256: 4132324b848c0ea65579f24fa04211b254fe95af84242069e1a268bf370ddbb5
build:
noarch: python
number: 1
rpaths:
- lib/R/lib/
- lib/
requirements:
host:
- python
- setuptools
- bedtools
- pybedtools
- matplotlib
- pandas
- numpy
- scipy
- seaborn
- r
- r-upsetr
- r-corrplot
- r-cairo
run:
- python
- bedtools
- pybedtools
- matplotlib
- pandas
- numpy
- scipy
- seaborn
- r
- r-upsetr
- r-corrplot
- r-cairo
test:
imports:
- intervene
- intervene.example_data
- intervene.example_data.ENCODE_hESC
- intervene.example_data.Gene_list
- intervene.example_data.dbSUPER_mm9
- intervene.modules
- intervene.modules.pairwise
- intervene.modules.upset
- intervene.modules.venn
commands:
- intervene --help
about:
home: https://github.com/asntech/intervene
license: MIT License
summary: 'A tool for intersection of multiple gene or genomic region sets and visualization as venn diagrams, UpSet plots or pariwaise heatmaps'
license_family: MIT
extra:
identifiers:
- biotools:Intervene
- doi:10.1186/s12859-017-1708-7