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package:
name: probamconvert
version: "1.0.2"
about:
home: 'https://github.com/Biobix/proBAMconvert'
summary: proBAMconvert is a conversion tool to convert common peptide identification files (mzIdentML, pepXML, mzTAB) to the proBAM or proBED format
license: Apache License
source:
url: https://github.com/Biobix/proBAMconvert/archive/a94913a16339ca58ae43a8e40d26acfd6725da40.tar.gz
md5: 17d68ecec97405e8c2198dfd2e7d2383
build:
number: 2
skip: True # [py3k or osx]
requirements:
run:
- python
- cogent
- pysam >=0.9
- mysql-python
- lxml
- numpy
- matplotlib
- pyteomics
- xz
- bioservices
- icu 58.*
test:
commands:
- proBAM.py --help