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{% set name = "sprai" %}
{% set version = "0.9.9.23" %}
package:
name: {{ name|lower }}
version: {{ version }}
build:
number: 1
skip: True # [osx]
source:
url: http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.23.tar.gz
md5: 8c4978fe51d51c89ea7bccd99af47f25
requirements:
build:
- {{ compiler('c') }}
host:
- python <3
- perl
- perl-app-cpanminus
- perl-module-build
run:
- blast
- wgs-assembler
- python <3
- perl
- perl-app-cpanminus
- perl-module-build
test:
commands:
- ezez_vx1.pl 2>&1 | grep USAGE
about:
home: http://zombie.cb.k.u-tokyo.ac.jp/sprai/
summary: Sprai (single-pass read accuracy improver) is a tool to correct sequencing errors in
single-pass reads for de novo assembly. It is originally designed for correcting sequencing
errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs)
generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of
error-corrected reads; instead, Sprai aims at maximizing the continuity (i.e., N50 contig length)
of assembled contigs after error correction.
license: MIT License
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