I think I got them all

bioconda · 7b2a95ff850e4ff8de8ff3d738b061ffe0d88baf · jerowe committed Feb 23, 2017 · Feb 23, 2017 · 7b2a95f
1 parent 77de3c0
commit 7b2a95ff850e4ff8de8ff3d738b061ffe0d88baf
diff --git a/config.yml b/config.yml
@@ -3,6 +3,8 @@ blacklists:
     - "sorted-r-blacklist"
     - "build-fail-blacklist"
     - "boost-1.61-migration-blacklist"
+    - "perl-gcc-blacklist"
+    - "perl-unable-to-find-blacklist"
 
 docker_image: "condaforge/linux-anvil"
 
diff --git a/perl-FAIL b/perl-FAIL
@@ -0,0 +1,17 @@
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-font-afm-1.20-pl5.22.0_1.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-text-wrap-2013.0523-1.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-module-load-conditional-0.62-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-test-unit-lite-0.1202-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-digest-md5-2.53-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-time-piece-1.27-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-xsloader-0.17-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
+ERROR bioconda_utils.build:build_recipes(386): BIOCONDA BUILD SUMMARY: FAILED recipe perl-xsloader-0.22-pl5.22.0_0.tar.bz2, environment CONDA_R=3.3.1;CONDA_GSL=1.16;CONDA_GMP=5.1;CONDA_HDF5=1.8.17;CONDA_NPY=110;CONDA_PERL=5.22.0;CONDA_BOOST=1.61;CONDA_PY=27;CONDA_NCURSES=5.9
+
diff --git a/perl-gcc-blacklist b/perl-gcc-blacklist
@@ -0,0 +1,2 @@
+recipes/perl-time-hires
+recipes/perl-sub-identify/0.12
diff --git a/perl-unable-to-find-blacklist b/perl-unable-to-find-blacklist
@@ -0,0 +1 @@
+recipes/perl-font-afm
diff --git a/recipes/perl-archive-tar/1.96/meta.yaml b/recipes/perl-archive-tar/1.96/meta.yaml
@@ -1,47 +0,0 @@
-{% set name = "perl-archive-tar" %}
-{% set version = "1.96" %}
-{% set sha256 = "None" %}
-
-package:
-  name: {{ name }}
-  version: {{ version }}
-
-#source:
-  #fn: Archive-Tar-1.96.tar.gz
-  #url: https://cpan.metacpan.org/authors/id/B/BI/BINGOS/Archive-Tar-1.96.tar.gz
-  #sha256: {{ sha256 }}
-
-# If this is a new build for the same version, increment the build
-# number. If you do not include this key, it defaults to 0.
-build:
-  number: 0
-
-requirements:
-  build:
-    - perl
-
-  run:
-    - perl
-
-test:
-  # Perl 'use' tests
-  imports:
-    - Archive::Tar
-    - Archive::Tar::Constant
-    - Archive::Tar::File
-
-  # You can also put a file called run_test.pl (or run_test.py) in the recipe
-  # that will be run at test time.
-
-  # requires:
-    # Put any additional test requirements here.  For example
-    # - nose
-
-about:
-  home: http://metacpan.org/pod/Archive::Tar
-  license: perl_5
-  summary: 'Manipulates TAR archives'
-
-# See
-# http://docs.continuum.io/conda/build.html for
-# more information about meta.yaml
diff --git a/recipes/perl-archive-tar/meta.yaml b/recipes/perl-archive-tar/meta.yaml
@@ -18,6 +18,7 @@ requirements:
     - perl-io-zlib
     - perl-test-harness
     - perl-test-simple
+    - perl-module-build
 
   run:
     - perl
diff --git a/recipes/perl-attribute-handlers/0.96/meta.yaml b/recipes/perl-attribute-handlers/0.96/meta.yaml
@@ -25,8 +25,8 @@ requirements:
 
 test:
   # Perl 'use' tests
-  imports:
-    - Attribute::Handlers
+  commands:
+    - perl -e "use Attribute::Handlers"
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-digest-md5/2.53/meta.yaml b/recipes/perl-digest-md5/2.53/meta.yaml
@@ -1,45 +0,0 @@
-{% set name = "perl-digest-md5" %}
-{% set version = "2.53" %}
-{% set sha256 = "cde667c0c0c8a4d819d332ba9a4cad7e9f75fc7cabd490aae405ce7bc54d5152" %}
-
-package:
-  name: {{ name }}
-  version: {{ version }}
-
-#source:
-  #fn: Digest-MD5-2.53.tar.gz
-  #url: https://cpan.metacpan.org/authors/id/G/GA/GAAS/Digest-MD5-2.53.tar.gz
-  #sha256: {{ sha256 }}
-
-# If this is a new build for the same version, increment the build
-# number. If you do not include this key, it defaults to 0.
-build:
-  number: 0
-
-requirements:
-  build:
-    - perl
-
-  run:
-    - perl
-
-test:
-  # Perl 'use' tests
-  imports:
-    - Digest::MD5
-
-  # You can also put a file called run_test.pl (or run_test.py) in the recipe
-  # that will be run at test time.
-
-  # requires:
-    # Put any additional test requirements here.  For example
-    # - nose
-
-about:
-  home: http://metacpan.org/pod/Digest::MD5
-  license: perl_5
-  summary: 'Perl interface to the MD-5 algorithm'
-
-# See
-# http://docs.continuum.io/conda/build.html for
-# more information about meta.yaml
diff --git a/recipes/perl-digest-sha/5.88/meta.yaml b/recipes/perl-digest-sha/5.88/meta.yaml
@@ -25,8 +25,8 @@ requirements:
 
 test:
   # Perl 'use' tests
-  imports:
-    - Digest::SHA
+  commands:
+    - perl -e "use Digest::SHA"
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-filter-simple/0.91/meta.yaml b/recipes/perl-filter-simple/0.91/meta.yaml
@@ -25,8 +25,8 @@ requirements:
 
 test:
   # Perl 'use' tests
-  imports:
-    - Filter::Simple
+  commands:
+    - perl -e "use Filter::Simple"
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-font-afm/meta.yaml b/recipes/perl-font-afm/meta.yaml
@@ -36,5 +36,5 @@ test:
 
 about:
   home: http://metacpan.org/pod/Font-AFM
-  license: unknown
+  license: perl_5 
   summary: 'Interface to Adobe Font Metrics files'
diff --git a/recipes/perl-module-load-conditional/0.62/meta.yaml b/recipes/perl-module-load-conditional/0.62/meta.yaml
@@ -25,8 +25,8 @@ requirements:
 
 test:
   # Perl 'use' tests
-  imports:
-    - Module::Load::Conditional
+  commands:
+    - perl -e "use Module::Load::Conditional"
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-safe/2.37/meta.yaml b/recipes/perl-safe/2.37/meta.yaml
@@ -25,8 +25,8 @@ requirements:
 
 test:
   # Perl 'use' tests
-  imports:
-    - Safe
+  commands:
+    - perl -e "use Safe" 
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-symbol-util/0.0203/build.sh b/recipes/perl-symbol-util/0.0203/build.sh
@@ -1,25 +0,0 @@
-#!/bin/bash
-
-# If it has Build.PL use that, otherwise use Makefile.PL
-if [ -f Build.PL ]; then
-    perl Build.PL
-    perl ./Build
-    perl ./Build test
-    # Make sure this goes in site
-    perl ./Build install --installdirs site
-elif [ -f Makefile.PL ]; then
-    # Make sure this goes in site
-    perl Makefile.PL INSTALLDIRS=site
-    make
-    make test
-    make install
-else
-    echo 'Unable to find Build.PL or Makefile.PL. You need to modify build.sh.'
-    exit 1
-fi
-
-# Add more build steps here, if they are necessary.
-
-# See
-# http://docs.continuum.io/conda/build.html
-# for a list of environment variables that are set during the build process.
diff --git a/recipes/perl-symbol-util/0.0203/meta.yaml b/recipes/perl-symbol-util/0.0203/meta.yaml
@@ -1,45 +0,0 @@
-{% set name = "perl-symbol-util" %}
-{% set version = "0.0203" %}
-{% set sha256 = "55b661dd22f9ce9b9be5a7e0a3f5289ac00cd254c21e3d8603289a565ae6dc32" %}
-
-package:
-  name: {{ name }}
-  version: {{ version }}
-
-source:
-  fn: Symbol-Util-0.0203.tar.gz
-  url: https://cpan.metacpan.org/authors/id/D/DE/DEXTER/Symbol-Util-0.0203.tar.gz
-  sha256: {{ sha256 }}
-
-# If this is a new build for the same version, increment the build
-# number. If you do not include this key, it defaults to 0.
-build:
-  number: 0
-
-requirements:
-  build:
-    - perl
-
-  run:
-    - perl
-
-test:
-  # Perl 'use' tests
-  imports:
-    - Symbol::Util
-
-  # You can also put a file called run_test.pl (or run_test.py) in the recipe
-  # that will be run at test time.
-
-  # requires:
-    # Put any additional test requirements here.  For example
-    # - nose
-
-about:
-  home: http://metacpan.org/pod/Symbol::Util
-  license: perl_5
-  summary: 'Additional utils for Perl symbols manipulation'
-
-# See
-# http://docs.continuum.io/conda/build.html for
-# more information about meta.yaml
diff --git a/recipes/perl-xsloader/0.17/build.sh → recipes/perl-test-more/1.001002/bld.bat b/recipes/perl-xsloader/0.17/build.sh → recipes/perl-test-more/1.001002/bld.bat
@@ -1,2 +1 @@
-#!/bin/bash
 echo "Nothing to do."
diff --git a/recipes/perl-archive-tar/1.96/build.sh → recipes/perl-test-more/1.001002/build.sh b/recipes/perl-archive-tar/1.96/build.sh → recipes/perl-test-more/1.001002/build.sh
diff --git a/recipes/perl-xsloader/0.17/meta.yaml → recipes/perl-test-more/1.001002/meta.yaml b/recipes/perl-xsloader/0.17/meta.yaml → recipes/perl-test-more/1.001002/meta.yaml
@@ -1,13 +1,13 @@
-{% set name = "perl-xsloader" %}
-{% set version = "0.17" %}
+{% set name = "perl-test-more" %}
+{% set version = "1.001002" %}
 {% set sha256 = "" %}
 
 package:
   name: {{ name }}
   version: {{ version }}
 
 #source:
-  #fn: XSLoader-0.24.tar.gz
+  #fn: 
   #url: 
   #sha256: {{ sha256 }}
 
@@ -23,10 +23,9 @@ requirements:
   run:
     - perl
 
-test:
+# test:
   # Perl 'use' tests
-  imports:
-    - XSLoader
+  # imports:
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
@@ -36,9 +35,9 @@ test:
     # - nose
 
 about:
-  home: https://metacpan.org/module/XSLoader
+  home: http://metacpan.org/pod/Test::More
   license: perl_5
-  summary: 'Dynamically load C libraries into Perl code'
+  summary: 'yet another framework for writing test scripts'
 
 # See
 # http://docs.continuum.io/conda/build.html for
diff --git a/recipes/perl-test-unit-lite/0.1202/meta.yaml b/recipes/perl-test-unit-lite/0.1202/meta.yaml
@@ -19,15 +19,15 @@ build:
 requirements:
   build:
     - perl
+    - perl-module-build
 
   run:
     - perl
 
 test:
   # Perl 'use' tests
-  imports:
-    - Test::Unit::Lite
-    - Test::Unit::Lite::AllTests
+  commands:
+    - perl -e "use Test::Unit::Lite"
 
   # You can also put a file called run_test.pl (or run_test.py) in the recipe
   # that will be run at test time.
diff --git a/recipes/perl-digest-md5/2.53/build.sh → recipes/perl-text-wrap/bld.bat b/recipes/perl-digest-md5/2.53/build.sh → recipes/perl-text-wrap/bld.bat
@@ -1,2 +1 @@
-#!/bin/bash
 echo "Nothing to do."
diff --git a/recipes/perl-text-wrap/build.sh b/recipes/perl-text-wrap/build.sh
@@ -1,3 +1,2 @@
-#!/bin/sh
-
-cpanm -n -f -i .
+#!/bin/bash
+echo "Nothing to do."