From 81b3f6faae6fd35a691cb6703dc9ae8853e2baad Mon Sep 17 00:00:00 2001
From: tkosciol <tkosciolek@ucsd.edu>
Date: Wed, 5 Jul 2017 11:41:50 -0700
Subject: [PATCH] updates to config.yml

---
 microprot/snakemake/config.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/microprot/snakemake/config.yml b/microprot/snakemake/config.yml
index bc87e49..540e03e 100644
--- a/microprot/snakemake/config.yml
+++ b/microprot/snakemake/config.yml
@@ -53,7 +53,7 @@ split_Pfam:
         min_fragment_length: 40
 
 MSA_hhblits:
-    params: '-n 3 -e 0.001 -maxfilt 500000 -diff inf -id 99 -cov 50 -cpu 8'
+    params: '-n 3 -e 0.001 -maxfilt 500000 -diff inf -id 99 -cov 50'
     DB: '/projects/microprot/dbs/uniclust30_2017_04/uniclust30_2017_04'
 
 MSA_ripe: