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test_denoiser
test_parallel
test_support_files
test_workflow
__init__.py
all_tests.py
test_add_alpha_to_mapping_file.py
test_add_qiime_labels.py
test_adjust_seq_orientation.py
test_align_seqs.py
test_alpha_diversity.py
test_assign_taxonomy.py
test_barcode.py
test_beta_diversity.py
test_beta_metrics.py
test_biplots.py
test_categorized_dist_scatterplot.py
test_clean_raxml_parsimony_tree.py
test_cluster_quality.py
test_collate_alpha.py
test_colors.py
test_compare_alpha_diversity.py
test_compare_categories.py
test_compare_distance_matrices.py
test_compare_taxa_summaries.py
test_compare_trajectories.py
test_compute_taxonomy_ratios.py
test_convert_fastaqual_fastq.py
test_core_microbiome.py
test_demultiplex_fasta.py
test_denoise_wrapper.py
test_detrend.py
test_differential_abundance.py
test_distance_matrix_from_mapping.py
test_estimate_observation_richness.py
test_exclude_seqs_by_blast.py
test_extract_barcodes.py
test_filter.py
test_filter_alignment.py
test_filter_otus_by_sample.py
test_format.py
test_golay.py
test_group.py
test_hamming.py
test_hierarchical_cluster.py
test_identify_chimeric_seqs.py
test_join_paired_ends.py
test_make_2d_plots.py
test_make_bipartite_network.py
test_make_bootstrapped_tree.py
test_make_distance_boxplots.py
test_make_fastq.py
test_make_library_id_lists.py
test_make_otu_heatmap.py
test_make_otu_network.py
test_make_otu_table.py
test_make_per_library_sff.py
test_make_phylogeny.py
test_make_rarefaction_plots.py
test_map_reads_to_reference.py
test_normalize_table.py
test_otu_significance.py
test_parse.py
test_pick_otus.py
test_pick_rep_set.py
test_plot_rank_abundance_graph.py
test_plot_semivariogram.py
test_plot_taxa_summary.py
test_principal_coordinates.py
test_process_sff.py
test_quality_scores_plot.py
test_rarefaction.py
test_relatedness.py
test_remote.py
test_shared_phylotypes.py
test_simsam.py
test_sort.py
test_split.py
test_split_libraries.py
test_split_libraries_fastq.py
test_split_libraries_lea_seq.py
test_stats.py
test_summarize_taxa.py
test_supervised_learning.py
test_transform_coordinate_matrices.py
test_tree_compare.py
test_trim_sff_primers.py
test_truncate_fasta_qual_files.py
test_truncate_reverse_primer.py
test_util.py
test_validate_demultiplexed_fasta.py
test_validate_mapping_file.py