biss2014-repeat

Repeats project @ biss2014 by Pavel Dobrynin, Nikita Kartashov, Varvara Kononova, Alyona Mayakovskaya, Nadezhda Potapova

Results folder contains results so far.

sine_tran_div_0_50_sinec-fc3-r_sinec-fc2-b_sine-fc-g:

Family: SINE/tRNA Divergence: 0 - 50 Number of clusters: 10000 Points: SINEC_Fc3 - red SINEC_Fc2 - blue SINEC_Fc - green

Name		Name	Last commit message	Last commit date
Latest commit History 16 Commits
reports		reports
results		results
.gitignore		.gitignore
README.md		README.md
divergence-frequencies-report.txt		divergence-frequencies-report.txt
fasta_sequence.py		fasta_sequence.py
line_repeats_to_align.txt		line_repeats_to_align.txt
repeat.py		repeat.py
sine_repeats_to_align.txt		sine_repeats_to_align.txt
step1_reading_writing_file.py		step1_reading_writing_file.py
step2_sorting_aggregating.py		step2_sorting_aggregating.py
step3_plotting.py		step3_plotting.py
step4_statistics.py		step4_statistics.py
utils.py		utils.py