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Newcastle University Bioinformatics Support Unit Website
BSU recommended workflows and best practices
Dynamic Interactive XY Plots - a web project using Django, D3 and Jquery.
Utility Python scripts
Example RNA-Seq scripts
scripts and data for the comparison found at http://sjcockell.me/2015/05/18/alignment-free-transcriptome-quantification/
Templates for knitr reports
Code snippets for visualising data using R.
Shiny scripts for web-based visulisations
Shell scripts (mostly bash) for job control, running pipelines, recording parameters etc.