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Add brownie and karect as submodules

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gmiclotte committed Feb 21, 2018
1 parent 780a2fd commit a2fa477c8d0a62370d6c130dc603cc824168a507
Showing with 27 additions and 4 deletions.
  1. +6 −0 .gitmodules
  2. +1 −0 brownie
  3. +19 −4 compile.sh
  4. +1 −0 karect
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@@ -0,0 +1,6 @@
[submodule "brownie"]
path = brownie
url = git@github.com:/biointec/brownie.git
[submodule "karect"]
path = karect
url = https://github.com/aminallam/karect.git
Submodule brownie added at ec9a6f
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@@ -1,12 +1,27 @@
#!/bin/bash
rm src/*~
mkdir -p build
cd build
cmake ../
make
cmake ..
make -j
cd ..
mkdir -p bin
cp -b ./build/src/jabba ./bin/jabba
cp ./build/src/jabba ./bin/jabba
#cd src
#doxygen ../Profiling/Doxyfile > ../Profiling/doxygen_output
#pmccabe -vt *.hpp *.cpp > ../Profiling/pmccabe_output
git submodule update --init
cd brownie
mkdir -p build
cd build
cmake -DMAXKMERLENGTH=75 ..
make -j
cd ..
cd ..
cp ./brownie/build/src/brownie ./bin/brownie
cd karect
make -j
cd ..
cp ./karect/karect ./bin/karect
1 karect
Submodule karect added at ba3ad5

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