From e7d09d0081e07a2b3ab1dc5eca7f5a11ce3b7d82 Mon Sep 17 00:00:00 2001
From: josemduarte <jose.m.duarte@gmail.com>
Date: Thu, 25 Apr 2024 16:14:18 -0700
Subject: [PATCH] Fixing logging clash in structure module

---
 biojava-structure/pom.xml | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/biojava-structure/pom.xml b/biojava-structure/pom.xml
index 3a9a58ced0..cde4be0064 100644
--- a/biojava-structure/pom.xml
+++ b/biojava-structure/pom.xml
@@ -40,6 +40,13 @@
 			<artifactId>mmtf-codec</artifactId>
 			<version>${mmtf.version}</version>
 			<scope>compile</scope>
+			<exclusions>
+				<!-- This is needed because mmtf uses slf4j 1.7 and the log4j2 slf4j1 binding, somehow clashing with slf4j2 in this repo -->
+				<exclusion>
+					<groupId>org.apache.logging.log4j</groupId>
+					<artifactId>log4j-slf4j-impl</artifactId>
+				</exclusion>
+			</exclusions>
 		</dependency>
 		<dependency>
 			<groupId>org.biojava</groupId>