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Affyio: Moved CEL definition into header file

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pjotrp committed Jan 27, 2010
1 parent e93b6f5 commit 39c4fa8c138b11d9cd17d48164f7ff447dd9d324
Showing with 34 additions and 33 deletions.
  1. +0 −33 src/clibs/affyio/src/read_abatch.c
  2. +34 −0 src/clibs/affyio/src/read_abatch.h
@@ -206,39 +206,6 @@ struct thread_data{
#define BUF_SIZE 1024


/******************************************************************
**
** A "C" level object designed to hold information for a
** single CEL file
**
** These should be created using the function
**
** read_cel_file()
**
**
**
*****************************************************************/

typedef struct{
detailed_header_info header;

/** these are for storing the intensities, the sds and the number of pixels **/
double *intensities;
double *stddev;
double *npixels;

/** these are for storing information in the masks and outliers section **/

int nmasks;
int noutliers;

short *masks_x, *masks_y;
short *outliers_x, *outliers_y;

} CEL;






@@ -25,5 +25,39 @@ typedef struct{
char *ScanDate;
} detailed_header_info;

/******************************************************************
**
** A "C" level object designed to hold information for a
** single CEL file
**
** These should be created using the function
**
** read_cel_file()
**
**
**
*****************************************************************/

typedef struct{
detailed_header_info header;

/** these are for storing the intensities, the sds and the number of pixels **/
double *intensities;
double *stddev;
double *npixels;

/** these are for storing information in the masks and outliers section **/

int nmasks;
int noutliers;

short *masks_x, *masks_y;
short *outliers_x, *outliers_y;

} CEL;

extern CEL *read_cel_file(const char *filename, int read_intensities_only);



#endif

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