From 7cfa7facdccdf7849df3c0185e4b66b0d5ef7f81 Mon Sep 17 00:00:00 2001 From: Steve Bond Date: Sun, 16 Dec 2018 12:24:29 -0500 Subject: [PATCH] Update data file division in amend metadata test to new BioPython --- buddysuite/tests/test_seqbuddy/test_sb_api.py | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/buddysuite/tests/test_seqbuddy/test_sb_api.py b/buddysuite/tests/test_seqbuddy/test_sb_api.py index 9dfbb2a..2f35684 100644 --- a/buddysuite/tests/test_seqbuddy/test_sb_api.py +++ b/buddysuite/tests/test_seqbuddy/test_sb_api.py @@ -50,14 +50,14 @@ def test_amend_metadata_str_attr(sb_resources, hf, monkeypatch): """ There are limited number of values that biopython will accept - ['BCT', 'CON', 'ENV', 'EST', 'FUN', 'GSS', 'HTC', 'HTG', 'HUM', - 'INV', 'MAM', 'MUS', 'PAT', 'PHG', 'PLN', 'PRI', 'PRO', 'ROD', - 'STS', 'SYN', 'TGN', 'UNA', 'UNC', 'VRL', 'VRT', 'XXX'] + ["PRI", "ROD", "MAM", "VRT", "INV", "PLN", "BCT", + "VRL", "PHG", "SYN", "UNA", "EST", "PAT", "STS", + "GSS", "HTG", "HTC", "ENV", "CON"] """ # data_file_division tester = sb_resources.get_one("p g") - tester = Sb.amend_metadata(tester, "data_file_division", "HUM", ".*") - assert hf.buddy2hash(tester) == "a834ade7ffdc453b9c61817c9138a55", print(tester) + tester = Sb.amend_metadata(tester, "data_file_division", "PRI", ".*") + assert hf.buddy2hash(tester) == "68cbefe01be215c373b75ee5cb4b0d4c" tester = sb_resources.get_one("p g") tester = Sb.amend_metadata(tester, "data_file_division", "FOO", ".*")