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general question #7

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matthdsm opened this Issue Aug 29, 2017 · 1 comment

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@matthdsm

matthdsm commented Aug 29, 2017

Hi,

I'm looking for a js module that can read and query compressed and indexed vcf files from a remote location (e.g. S3-buckets). I was wondering if this is the scope of this module. If so, would it be possible to provide some documentation about the possiblities and how to use them?

Alternatively, if my question seems out of scope, do you know about a module that can do such thing?
Thanks
M

@shyamrallapalli

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shyamrallapalli commented Sep 6, 2017

apologies for late reply @matthdsm
It is currently out of scope but will think about as future improvement.

for the moment you could possibly try to use
https://github.com/jsa-aerial/JS-Binary-VCF-Tabix

@bmpvieira bmpvieira moved this from Next to Backlog in Bionode Project Board Sep 12, 2017

@bmpvieira bmpvieira closed this Oct 14, 2017

@bmpvieira bmpvieira moved this from Backlog to Next in Bionode Project Board Oct 14, 2017

@bmpvieira bmpvieira moved this from Next to Done in Bionode Project Board Oct 14, 2017

risabhkumar-cc added a commit to causecode/bionode-vcf that referenced this issue Mar 21, 2018

@bmpvieira bmpvieira added the feature label Mar 21, 2018

bmpvieira added a commit that referenced this issue Mar 21, 2018

Merge pull request #11 from causecode/risabh/add-stream-parse
Added readStream, added docs. Fixes  #10 #7
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