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Added a tutorial on how to run "two-mappers" example #55

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merged 8 commits into from Jun 13, 2017

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@tiagofilipe12
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tiagofilipe12 commented Jun 13, 2017

This PR adds a README.md to examples/pipelines/two-mappers that can be used as a walk-through guide on how to build a similar pipeline or even to run that pipeline. Also, adds a pipeline_lazy.js that is intended to provide a solution to the proposed challenge in the README.md.

@tiagofilipe12 tiagofilipe12 self-assigned this Jun 13, 2017

@tiagofilipe12 tiagofilipe12 requested a review from thejmazz Jun 13, 2017

Also, you need to have installed:
1) **Node.js** version 7 or higher.

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@thejmazz

thejmazz Jun 13, 2017

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I think 6 is sufficient

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@tiagofilipe12

tiagofilipe12 Jun 13, 2017

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Shall we put 6? I only tested 4 and 7.

@codecov-io

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codecov-io commented Jun 13, 2017

Codecov Report

Merging #55 into master will not change coverage.
The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff           @@
##           master      #55   +/-   ##
=======================================
  Coverage   80.64%   80.64%           
=======================================
  Files          36       36           
  Lines         806      806           
  Branches       99       99           
=======================================
  Hits          650      650           
  Misses        156      156

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5) **[bwa](http://bio-bwa.sourceforge.net/)**
6) **[samtools](http://samtools.sourceforge.net/)**
However, don't worry you can use [this](https://github.com/tiagofilipe12/docker-watermill-tutorial)

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@thejmazz

thejmazz Jun 13, 2017

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we can publish these on bionode organization on docker hub later

@thejmazz

lgtm

@thejmazz thejmazz merged commit d9bdd40 into bionode:master Jun 13, 2017

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codecov/patch Coverage not affected when comparing bd3cf7f...d79fbf4
Details
codecov/project 80.64% remains the same compared to bd3cf7f
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continuous-integration/travis-ci/pr The Travis CI build passed
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security/snyk No new vulnerabilities
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