New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

VC with snakemake #6

Closed
thejmazz opened this Issue May 22, 2016 · 1 comment

Comments

2 participants
@thejmazz
Member

thejmazz commented May 22, 2016

Home Documentation

Presentations

Tutorials

Examples

Papers

  • Snakemake—a scalable bioinformatics workflow engine
  • Parallelization, Scalability, and Reproducibility in Next-Generation Sequencing Analysis

Resources

Discussion

Illustrate

  • embedded Python
  • wrappers
  • benchmarks
  • reports
  • dag
  • expand
  • config
  • input functions
  • rule params
  • logging
  • temporary/protected files

@thejmazz thejmazz referenced this issue May 22, 2016

Closed

Week 1 #9

7 of 7 tasks complete

@thejmazz thejmazz added this to the Week 1 milestone May 23, 2016

@thejmazz

This comment has been minimized.

Member

thejmazz commented Jun 2, 2016

snakemake --forceall --dag | dot -Tpng > dag.png
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment