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[cage cleaning]

* fixing POD links and errors

svn path=/bioperl-live/trunk/; revision=16110
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commit d4549d804d5eb96de2c7cf8504ae79fefe607bc3 1 parent 2534adb
cjfields authored carandraug committed
Showing with 20 additions and 20 deletions.
  1. +20 −20 Bio/FeatureIO/vecscreen_simple.pm
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40 Bio/FeatureIO/vecscreen_simple.pm
@@ -7,15 +7,15 @@ output
=head1 SYNOPSIS
-# read features
-my $fin = Bio::FeatureIO->new(-file=>'vecscreen.out',
- -format=>'vecscreen_simple');
-my @vec_regions;
-while (my $f = $fin->next_feature) {
- push @vec_regions, $f;
-}
-
-# write features NOT IMPLEMENTED
+ # read features
+ my $fin = Bio::FeatureIO->new(-file=>'vecscreen.out',
+ -format=>'vecscreen_simple');
+ my @vec_regions;
+ while (my $f = $fin->next_feature) {
+ push @vec_regions, $f;
+ }
+
+ # write features NOT IMPLEMENTED
=head1 DESCRIPTION
@@ -107,11 +107,11 @@ sub _initialize {
=head2 next_feature
-Title : next_feature
-Usage : $io->next_feature()
-Function: read the next feature from the vecscreen output file
-Args : none
-Returns : Bio::SeqFeatureI object
+ Title : next_feature
+ Usage : $io->next_feature()
+ Function: read the next feature from the vecscreen output file
+ Args : none
+ Returns : Bio::SeqFeatureI object
=cut
@@ -167,12 +167,12 @@ sub next_feature {
=head2 write_feature (NOT IMPLEMENTED)
-Title : write_feature
-Usage : $io->write_feature($feature)
-Function: write a Bio::SeqFeatureI object in vecscreen -f 3 format
-Example :
-Args : Bio::SeqFeatureI object
-Returns :
+ Title : write_feature
+ Usage : $io->write_feature($feature)
+ Function: write a Bio::SeqFeatureI object in vecscreen -f 3 format
+ Example :
+ Args : Bio::SeqFeatureI object
+ Returns :
=cut
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