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Commits on Dec 21, 2010
  1. @hyphaltip

    remove Id

    hyphaltip committed Dec 21, 2010
Commits on Mar 11, 2010
  1. remove redundant Root modules (these shuld be using whatever is in @INC

    svn path=/bioperl-dev/trunk/; revision=16918
    cjfields committed Mar 11, 2010
Commits on Mar 3, 2010
  1. add a test case and stub for tests (not run yet)

    svn path=/bioperl-dev/trunk/; revision=16883
    cjfields committed Mar 3, 2010
  2. add Nathan Hillson as contrib

    svn path=/bioperl-dev/trunk/; revision=16881
    cjfields committed Mar 3, 2010
  3. additional method to grab (so-called) persistent data

    svn path=/bioperl-dev/trunk/; revision=16880
    cjfields committed Mar 3, 2010
  4. way long-overdue init commit of primer3 rewrite (needs tests)

    svn path=/bioperl-dev/trunk/; revision=16879
    cjfields committed Mar 3, 2010
Commits on Feb 9, 2010
  1. doh. must be late

    svn path=/bioperl-dev/trunk/; revision=16827
    maj committed Feb 9, 2010
  2. tweak

    svn path=/bioperl-dev/trunk/; revision=16826
    maj committed Feb 9, 2010
  3. reagt.

    svn path=/bioperl-dev/trunk/; revision=16825
    maj committed Feb 9, 2010
  4. metadata element

    svn path=/bioperl-dev/trunk/; revision=16824
    maj committed Feb 9, 2010
Commits on Feb 6, 2010
  1. bug squish/test tweak

    svn path=/bioperl-dev/trunk/; revision=16821
    maj committed Feb 6, 2010
  2. working on integrating CommandExts refactor with existing client code…

    … (SABlast+, Bowtie)
    
    svn path=/bioperl-dev/trunk/; revision=16820
    maj committed Feb 6, 2010
Commits on Feb 5, 2010
  1. propset

    svn path=/bioperl-dev/trunk/; revision=16819
    maj committed Feb 5, 2010
  2. tweaks to accommodate BlastPlus.pm

    svn path=/bioperl-dev/trunk/; revision=16818
    maj committed Feb 5, 2010
  3. tweak

    svn path=/bioperl-dev/trunk/; revision=16817
    maj committed Feb 5, 2010
  4. tests for WrapperMaker

    svn path=/bioperl-dev/trunk/; revision=16816
    maj committed Feb 5, 2010
  5. refactoring CommandExts to handle self options

    svn path=/bioperl-dev/trunk/; revision=16815
    maj committed Feb 5, 2010
  6. adding ordered hashes via Tie:IxHash, if available (silently skips it…

    … if not)
    
    svn path=/bioperl-dev/trunk/; revision=16814
    maj committed Feb 5, 2010
  7. small xsd refactoring and coresponding xml handling

    svn path=/bioperl-dev/trunk/; revision=16813
    maj committed Feb 5, 2010
Commits on Feb 4, 2010
  1. adding self options functionality; tightening

    svn path=/bioperl-dev/trunk/; revision=16812
    maj committed Feb 4, 2010
Commits on Feb 3, 2010
  1. more WrapperMaker/CommandExts crosstalk

    svn path=/bioperl-dev/trunk/; revision=16811
    maj committed Feb 3, 2010
  2. pod build-out, various fixes

    svn path=/bioperl-dev/trunk/; revision=16810
    maj committed Feb 3, 2010
Commits on Feb 2, 2010
  1. schema tweaks and additions

    svn path=/bioperl-dev/trunk/; revision=16809
    maj committed Feb 2, 2010
  2. exporting wrapper object

    svn path=/bioperl-dev/trunk/; revision=16808
    maj committed Feb 2, 2010
  3. dev changes assoc w/WrapperMaker

    svn path=/bioperl-dev/trunk/; revision=16807
    maj committed Feb 2, 2010
Commits on Feb 1, 2010
  1. WrapperMaker now (apparently) reads, loads globals, and exports to na…

    …mespace, yay
    
    svn path=/bioperl-dev/trunk/; revision=16804
    maj committed Feb 1, 2010
  2. restructure

    svn path=/bioperl-dev/trunk/; revision=16803
    maj committed Feb 1, 2010
  3. tweak schema

    svn path=/bioperl-dev/trunk/; revision=16802
    maj committed Feb 1, 2010
Commits on Jan 31, 2010
  1. building out; fixes to schema

    svn path=/bioperl-dev/trunk/; revision=16793
    maj committed Jan 31, 2010
  2. starting WrapperMaker; will automagically create run wrappers via Wra…

    …pperBase and CommandExts using an XML program definitions file (specced in XSD)
    
    svn path=/bioperl-dev/trunk/; revision=16792
    maj committed Jan 31, 2010
Commits on Dec 6, 2009
  1. new feature: browse parent/base classes

    svn path=/bioperl-dev/trunk/; revision=16443
    maj committed Dec 6, 2009
Commits on Nov 16, 2009
  1. tweaks + retar

    svn path=/bioperl-dev/trunk/; revision=16380
    maj committed Nov 16, 2009
  2. addl unit tests for bioperl-mode

    svn path=/bioperl-dev/trunk/; revision=16378
    maj committed Nov 16, 2009
Commits on Oct 26, 2009
  1. svn path=/bioperl-dev/trunk/; revision=16280

    chmille4 committed Oct 26, 2009
Commits on Sep 22, 2009
  1. xemacs compatibility and distribution tar

    svn path=/bioperl-dev/trunk/; revision=16150
    maj committed Sep 22, 2009
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