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language: perl
perl:
- "5.20"
- "5.18"
- "5.16"
- "5.14"
- "5.12"
- "5.10"
env: PERL_CPANM_OPT="--notest --force --skip-satisfied"
install:
#This should solve problem installing Perl's DB_File & GraphViz
- "sudo apt-get install libdb-dev graphviz libgd2-xpm-dev libxml2-dev 2>&1 | tail -n 4"
#These are recommended or required Perl libraries:
- "cpanm GD 2>&1 | tail -n 1"
- "cpanm HTML::TableExtract DBI Data::Stag DB_File 2>&1 | tail -n 1"
- "cpanm DBD::mysql DBD::Pg DBD::SQLite 2>&1 | tail -n 1"
- "cpanm Algorithm::Munkres Array::Compare Convert::Binary::C Error 2>&1 | tail -n 1"
- "cpanm Graph SVG SVG::Graph GraphViz 2>&1 | tail -n 1"
- "cpanm XML::DOM::XPath XML::Parser XML::Parser::PerlSAX 2>&1 | tail -n 1"
- "cpanm XML::SAX XML::SAX::Writer XML::Simple XML::LibXML XML::Twig XML::Writer 2>&1 | tail -n 1"
- "cpanm PostScript::TextBlock Set::Scalar Sort::Naturally YAML | tail -n 1"
- "cpanm Math::Random SOAP::Lite Spreadsheet::ParseExcel | tail -n 1"
- "cpanm Bio::ASN1::EntrezGene | tail -n 1"
- "cpanm Bio::Phylo | tail -n 1"
- "cpanm Test::Weaken | tail -n 1"
- "cpanm Test::Memory::Cycle | tail -n 1"
#Test coverage from Coveralls
#- cpanm --quiet --notest Devel::Cover::Report::Coveralls
#for some reason tests and deps aren't skipped here. Will have to look into it more...
#git repos, seems to only work for simple checkouts, so pure perl only (TODO: look into before_script for more detail)
- "git clone https://github.com/bioperl/Bio-Root.git; export PERL5LIB=$( pwd )/Bio-Root/lib:$PERL5LIB"
#This installs BioPerl itself:
- "perl ./Build.PL --accept"
script:
- "./Build test"
#Devel::Cover coverage options are: statement, branch, condition, path, subroutine, pod, time, all and none
#- "./Build build && cover -test -report coveralls" #complete version coverage test
#- PERL5OPT=-MDevel::Cover=+ignore,prove,-coverage,statement,subroutine prove -lr t #limited version coverage test
#- cover -report coveralls
#TODO - send emails to bioperl-guts-l
notifications:
email:
recipients:
- bioperl-guts-l@lists.open-bio.org
- cjfields1@gmail.com
on_success: change
on_failure: change
# whitelist branches
branches:
only:
- master
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