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Fixed POD encoding issue

Using UTF-8 encoding and using POD command E<> to format them properly
Note that pod2text and perldoc render them differently
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1 parent f242511 commit f2d89ef2709f6d77115d28f3268c66fa04127670 @fangly fangly committed
Showing with 13 additions and 5 deletions.
  1. +4 −1 Bio/Tools/Geneid.pm
  2. +4 −2 Bio/Tools/GuessSeqFormat.pm
  3. +5 −2 examples/biblio/biblio-eutils-example.pl
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5 Bio/Tools/Geneid.pm
@@ -9,6 +9,9 @@
# POD documentation - main docs before the code
+
+=encoding utf-8
+
=head1 NAME
Bio::Tools::Geneid - Results of one geneid run
@@ -34,7 +37,7 @@ Bio::Tools::Geneid - Results of one geneid run
=head1 DESCRIPTION
This is the parser for the output of geneid by Enrique Blanco and
-Roderic Guigó (IMIM-UPF). See http://www1.imim.es/software/geneid. It
+Roderic GuigE<243> (IMIM-UPF). See http://www1.imim.es/software/geneid. It
relies on native geneid output format internally and will work with
geneid versions 1.0 and 1.1. Currently this module supports only the
default mode of operation which is to predict exons and assemble an
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6 Bio/Tools/GuessSeqFormat.pm
@@ -9,6 +9,8 @@
# You may distribute this module under the same terms as perl itself
#------------------------------------------------------------------
+=encoding utf-8
+
=head1 NAME
Bio::Tools::GuessSeqFormat - Module for determining the sequence
@@ -230,11 +232,11 @@ submitted via the web:
=head1 AUTHOR
-Andreas Kähäri, andreas.kahari@ebi.ac.uk
+Andreas KE<228>hE<228>ri, andreas.kahari@ebi.ac.uk
=head1 CONTRIBUTORS
-Heikki Lehväslaiho, heikki-at-bioperl-dot-org
+Heikki LehvE<228>slaiho, heikki-at-bioperl-dot-org
Mark A. Jensen, maj-at-fortinbras-dot-us
=cut
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7 examples/biblio/biblio-eutils-example.pl
@@ -1,4 +1,7 @@
#!/usr/bin/perl
+
+=encoding utf-8
+
=head1 NAME
biblio-eutils-example.pl
@@ -105,12 +108,12 @@ =head1 PubMed XML Example
<Initials>B</Initials>
</Author>
<Author ValidYN="Y">
- <LastName>Kubícková</LastName>
+ <LastName>KubE<237>ckovE<225></LastName>
<ForeName>B</ForeName>
<Initials>B</Initials>
</Author>
<Author ValidYN="Y">
- <LastName>Máslová</LastName>
+ <LastName>ME<225>slovE<225></LastName>
<ForeName>F</ForeName>
<Initials>B</Initials>
</Author>

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