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Commits on May 13, 2018
  1. Merge pull request #271 from thibauthourlier/patch-2

    cjfields committed May 13, 2018
    Fixed call to self instead of $self
Commits on May 2, 2018
  1. Fixed call to self instead of $self

    thibauthourlier committed May 2, 2018
    self->throw is called instead of $self->throw, so module does not seem to throw an error if the primary index file is not readable
Commits on Apr 13, 2018
  1. update MK usage return data

    hyphaltip committed Apr 13, 2018
    Provide a little more detail on MK results
Commits on Mar 20, 2018
Commits on Mar 5, 2018
  1. Merge pull request #269 from Endle/patch-1

    cjfields committed Mar 5, 2018
    change examples, refers to #268
Commits on Feb 18, 2018
  1. change examples, refers to #268

    Endle committed Feb 18, 2018
Commits on Feb 16, 2018
Commits on Jan 28, 2018
  1. fix precedence

    cjfields committed Jan 28, 2018
  2. get rid of "Bio::DB::IndexedBase::_strip_crnl redefined" error; it on…

    cjfields committed Jan 28, 2018
    …ly needs to be defined at class loading in a BEGIN block (once), not every time
Commits on Jan 24, 2018
  1. #261 - Fix hivdb (#262)

    majensen committed Jan 24, 2018
    * fix(hivdb) : Update LANL base url
    
    from http -> https (redirects were borking LWP::UserAgent)
    
    Also allow some tests to proceed in HIV.t that were skipped after
    server-side error
    
    * fix(hivdb) : update lanl-schema.xml
    
    NINE YEARS IN THE MAKING!
    
    * fix(hivdb) : update LANL base url
    
    in HIVQuery.pm (http->https)
    update tests
Commits on Dec 30, 2017
  1. Fixes #255. I only added 8 lines at the end of fasta.t. The other ch…

    pcantalupo committed Dec 30, 2017
    …anges
    
    are due to Atom editor removing whitespace from the ends of lines.
Commits on Dec 19, 2017
  1. Merge pull request #251 from zmughal/250-precedence-warnings

    cjfields committed Dec 19, 2017
    Change `or` to `||` to fix precedence warning
  2. Merge pull request #254 from bioperl/hyphaltip-bug253-patch-1

    cjfields committed Dec 19, 2017
    Fix bug 253 testing for defined
Commits on Dec 8, 2017
Commits on Dec 7, 2017
  1. Update codon tables to latest data

    heikkil committed Dec 7, 2017
    Resolves #256
Commits on Oct 12, 2017
  1. Fix bug 253 testing for defined

    hyphaltip committed Oct 12, 2017
    Fix bug #253 where need to use `defined` instead of just a true/false test since the value can be 0
Commits on Sep 13, 2017
  1. examples/align/clustalw.pl: remove file, now part of Bio-Tools-Run-Al…

    carandraug committed Sep 13, 2017
    …ignment-Clustalw distribution
Commits on Sep 12, 2017
Commits on Sep 11, 2017
  1. update Changes

    cjfields committed Sep 11, 2017
Commits on Sep 8, 2017
  1. fix remote test

    cjfields committed Sep 8, 2017
  2. bump version

    cjfields committed Sep 8, 2017
  3. fix flappy remote test

    cjfields committed Sep 8, 2017