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Commits on Jun 25, 2010
  1. move Bio::Expression completely into bioperl-microarray

    Chris Fields authored
Commits on Feb 21, 2009
  1. adding FEEDBACK:Support section to pod

    maj authored
    svn path=/bioperl-microarray/trunk/; revision=15554
Commits on Jul 4, 2006
  1. @arareko

    Updated bug reporting

    arareko authored
    svn path=/bioperl-microarray/trunk/; revision=11857
Commits on Jul 2, 2006
  1. @arareko

    Fixed spaces

    arareko authored
    svn path=/bioperl-microarray/trunk/; revision=11856
Commits on Jul 1, 2006
  1. @arareko

    Fixed spaces and URL's

    arareko authored
    svn path=/bioperl-microarray/trunk/; revision=11855
  2. @arareko

    Updating mailing lists URL

    arareko authored
    svn path=/bioperl-microarray/trunk/; revision=11854
Commits on Aug 16, 2004
  1. prevent spurious warnings by calling return() instead of next() from sub

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11853
Commits on Sep 17, 2003
  1. streamlined CVS repository, many large files gone.

    allenday authored
    added regression test and support for affymetrix MAS 5.0 scaled data file
    (read only).
    
    svn path=/bioperl-microarray/trunk/; revision=11848
  2. bad method name fix

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11846
Commits on Sep 12, 2003
  1. all tests pass

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11842
Commits on Sep 11, 2003
  1. featureset->featuregroup

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11841
Commits on Sep 8, 2003
  1. template arg was being ignored by load_array()

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11838
  2. fixing tests

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11837
  3. featureset -> featuregroup

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11836
  4. class::makemethods api change dropped flyweight destructor

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11835
  5. fixed unitialized values for -w warnings

    allenday authored
    fixed methodname call where methodname had changed (dropped _)
    
    svn path=/bioperl-microarray/trunk/; revision=11834
  6. fix

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11833
Commits on Sep 7, 2003
  1. doc fixes

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11831
Commits on Jun 28, 2003
  1. Simple Naming changes to reflect Bio::Expression::FeatureGroup

    crsto authored
    svn path=/bioperl-microarray/trunk/; revision=11829
Commits on Jun 24, 2003
  1. removed IO's mode() usage

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11828
Commits on Jun 17, 2003
  1. *** empty log message ***

    crsto authored
    svn path=/bioperl-microarray/trunk/; revision=11827
Commits on Jun 13, 2003
  1. MAGEified MAAS 5.0 txt file parser

    crsto authored
    svn path=/bioperl-microarray/trunk/; revision=11826
Commits on Jun 11, 2003
  1. updated dchipxls.pm to reflect MAGE renamings for ::Affy modules

    crsto authored
    svn path=/bioperl-microarray/trunk/; revision=11825
  2. updated affymetrix.pm to reflect MAGE renamings

    crsto authored
    svn path=/bioperl-microarray/trunk/; revision=11824
  3. New renamed Microarray::Affymetrix modules based on MAGE conventions:

    crsto authored
    	Array.pm -> ArrayDesign.pm
    	Data.pm -> CelArray.pm
    	dChipXLS.pm -> dChipArray.pm
    	Mas50Data -> Mas50TxtArray.pm
    
    Note on methods: replace all substrings in methods with "featureset" with "featuregroup".
    
    svn path=/bioperl-microarray/trunk/; revision=11823
  4. adding crsto's MAS5 parser

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11821
Commits on Jun 3, 2003
  1. adding affy mas5 parser.

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11819
Commits on May 19, 2003
  1. cel file fix for honxian@pcbi.upenn.edu

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11818
Commits on Jan 29, 2003
  1. forgotten commits

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11817
Commits on Jan 27, 2003
  1. *** empty log message ***

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11816
Commits on Nov 8, 2002
  1. array.pm had been a bio::root::io.. why?? fixed. adding changes to al…

    allenday authored
    …low construction of an Array object from
    
    features.  this is for database freeze/thawing i'm trying to get working.
    
    svn path=/bioperl-microarray/trunk/; revision=11815
Commits on Nov 5, 2002
  1. next_array() was crufty, cleaner now. adding a test script to show it…

    allenday authored
    … can
    
    read concatenated CEL files.
    
    svn path=/bioperl-microarray/trunk/; revision=11814
Commits on Nov 4, 2002
  1. stray debug statements commented/removed

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11813
  2. some spots on an affy array don't belong to any feature/featureset. now

    allenday authored
    considering these.
    
    svn path=/bioperl-microarray/trunk/; revision=11810
Commits on Oct 31, 2002
  1. cleaning up the interface classes, some doc fixes

    allenday authored
    svn path=/bioperl-microarray/trunk/; revision=11809
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