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Changes updated for the release

svn path=/bioperl-run/trunk/; revision=13663
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1 parent 063fc47 commit 93f5e6f5dba36e67e23b423b0f510f736604ea29 @hyphaltip hyphaltip committed Oct 8, 2005
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$Id$
Revision history for Bioperl run modules
+1.5.1 Release in sync with bioperl core
+
+ o First major release in a while, so lots of things in this release
+
+ o PHYLIP wrappers are updated for PHYLIP 3.6, some programs will no
+ longer work (DrawTree and DrawGram specifically) for 3.5 at ths
+ point. It will depend on whether or not anyone really wants this
+ if we'll add in the necessary stuf to support 3.5. It isn't
+ hard, just requires some stuff in th PhylipConf.pm modules.
+
+ o Bio::Tools::Run::Alignment::Muscle added
+
+ o PAML wrapper for Yn00 and Codeml are more forgiving about the
+ argument validation.
+
+ o Several wrappers updated for newer versions of the programs.
+ TribeMCL, Genewise, RepeatMasker
+
+
1.2.2 Release update in sync with bioperl core
o Soaplab

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