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Aug 23, 2012

  1. Daisie Huang

    Versioning added

    authored August 23, 2012

Feb 08, 2012

  1. bosborne

    Rm Id lines

    authored February 08, 2012
  2. bosborne

    Correct params and switches

    authored February 08, 2012
  3. bosborne

    Correct params and switches

    authored February 08, 2012

Jan 05, 2012

  1. Jason Stajich

    Merge pull request #4 from markjohnson/mark_johnson-email-update

    Updated my email address.
    authored January 04, 2012
  2. Mark Johnson

    Updated my email address.

    authored January 04, 2012

Jan 04, 2012

  1. bosborne

    Add missing arguments and a test

    authored January 04, 2012

Dec 14, 2011

  1. bosborne

    Change location of working dir, not sure what is correct here

    authored December 14, 2011
  2. bosborne

    Change location of tempdir, not sure what is correct here

    authored December 14, 2011
  3. bosborne

    Module and tests for Raxml

    authored December 14, 2011

Dec 13, 2011

  1. bosborne

    Add messages to *t

    authored December 13, 2011

Dec 06, 2011

  1. bosborne

    Remove unused code

    authored December 06, 2011

Dec 05, 2011

  1. bosborne

    Remove code related to MPI

    authored December 05, 2011
  2. bosborne

    Typo

    authored December 05, 2011
  3. bosborne

    Remove ID lines

    authored December 05, 2011
  4. bosborne

    Add no_memory_check

    authored December 05, 2011
  5. bosborne

    Add program_name param

    authored December 05, 2011

Dec 04, 2011

  1. bosborne

    Minimal documentation

    authored December 04, 2011
  2. bosborne

    Correct number

    authored December 04, 2011
  3. bosborne

    New module and test for FastTree

    authored December 04, 2011

Oct 14, 2011

  1. bosborne

    Remove code related to MPI, definitely the wrong place for it

    authored October 14, 2011

Oct 13, 2011

  1. bosborne

    Modify program_name() for MPI version, not sure all args are set corr…

    …ectly yet.
    authored October 13, 2011
  2. bosborne

    Modify program_name() for MPI version, not sure all args are set corr…

    …ectly yet.
    authored October 13, 2011
  3. bosborne

    Modify program_name() for MPI version, not sure all args are set corr…

    …ectly yet.
    authored October 13, 2011
  4. bosborne

    Add option for MPI, all tests pass

    authored October 13, 2011

Oct 10, 2011

  1. bosborne

    Minor edits

    authored October 09, 2011

Oct 09, 2011

  1. bosborne

    Correct number of tests, correct values

    authored October 09, 2011
  2. bosborne

    Minor edit

    authored October 09, 2011
  3. bosborne

    Value of will not always be 1, depends on value of BIOPERLDEBUG

    authored October 09, 2011
  4. bosborne

    Correct test number

    authored October 09, 2011

Oct 07, 2011

  1. bosborne

    Add test for hsp_length(), all tests pass

    authored October 07, 2011
  2. bosborne

    Fix *t, multiple failures due to wrong args, fix docs. All test pass.

    authored October 07, 2011

Oct 01, 2011

  1. bosborne

    Code was not passing args to the command, migrate to _set_from_args()…

    …, all tests pass
    authored October 01, 2011

Sep 30, 2011

  1. bosborne

    Add -seqtype param

    authored September 30, 2011

Sep 21, 2011

  1. bosborne

    Add some version 3 arguments plus documentation, all tests pass

    authored September 21, 2011
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